MRIQC: individual T1w report

Summary

  • BIDS filename: sub-4030_ses-1_run-02_T1w.
  • Date and time: 2022-12-06, 16:20.
  • MRIQC version: 0.16.1.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.7749849265653632
cnr1.7785721027179702
efc0.5634864259465151
fber1728.5747260749547
fwhmavg3.8768733333333336
fwhmx3.71449
fwhmy4.39824
fwhmz3.51789
icvscsf0.18489418945333758
icvsgm0.42467934680870517
icvswm0.39042646373795725
inumed1.982393503189087
inurange0.8926768481731409
qi10.0
qi20.00389715533253661
rpvecsf28.354700516257406
rpvegm13.227227788413895
rpvewm16.69904918061484
sizex176
sizey256
sizez256
snrcsf2.7393800647942004
snrgm8.765181944669564
snrtotal9.339508592006323
snrwm16.513963766555204
snrdcsf29.33995125954348
snrdgm62.76864912901789
snrdtotal56.74200699042177
snrdwm78.11742058270394
spacingx1.0
spacingy1.0
spacingz1.0
summarybgk2.7963904485222573
summarybgmad8.387130664808149
summarybgmean17.131844819605625
summarybgmedian13.904034554958344
summarybgn2317912.0
summarybgp052.7944383174180984
summarybgp9538.84950831532478
summarybgstdv11.5828717302015
summarycsfk8.14378131281505
summarycsfmad125.30171113689283
summarycsfmean408.4436484857631
summarycsfmedian375.6134040802717
summarycsfn18351.0
summarycsfp05237.45909994840622
summarycsfp95661.7366249710321
summarycsfstdv137.112471039729
summarygmk-0.13895086778649102
summarygmmad93.97628335266963
summarygmmean809.4363820825276
summarygmmedian803.5714088380337
summarygmn17312.0
summarygmp05671.1422954052687
summarygmp95971.745477772504
summarygmstdv91.67501656742414
summarywmk0.22424451983764992
summarywmmad58.30571558547352
summarywmmean1002.0138529767391
summarywmmedian1000.0681324750185
summarywmn219924.0
summarywmp05904.8527585864067
summarywmp951104.6210197657347
summarywmstdv60.55880180809424
tpmoverlapcsf0.16828757524490356
tpmoverlapgm0.44996196031570435
tpmoverlapwm0.5016846060752869
wm2max0.5133770891696465
AcquisitionMatrixPE246
AcquisitionNumber1
AcquisitionTime17:22:39.235000
BaseResolution256
BodyPartExaminedBRAIN
CoilCombinationMethodAdaptive Combine
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20220720
Dcm2bidsVersion2.1.7
DeviceSerialNumber67034
DwellTime3e-06
EchoNumber2
EchoTime0.00355
FlipAngle7
ImageOrientationPatientDICOM[0.0488089, 0.95013, 0.308011, 0.0074964, 0.308022, -0.95135]
ImageOrientationTextSag>Cor(2.8)>Tra(0.5)
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM']
ImagingFrequency123.258
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressFairbanks 710,Chicago ,Chicago,US,60611
InstitutionNameNU Tuna
InstitutionalDepartmentNameDepartment
InversionTime1.16
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
MatrixCoilModeGRAPPA
ModalityMR
NonlinearGradientCorrectionTrue
NumberOfAverages3
ParallelReductionFactorInPlane2
PartialFourier0.75
PatientPositionHFS
PercentPhaseFOV100
PercentSampling96
PhaseEncodingSteps185
PhaseResolution0.96
PixelBandwidth650
ProcedureStepDescriptionfMRI_STUDIES^MITTAL
ProtocolNametfl_epinav_ME3_1mm_p2
PulseSequenceDetails%CustomerSeq%\tfl_mgh_epinav_ABCD
ReceiveCoilActiveElementsHC1-7;NC1,2
ReceiveCoilNameHeadNeck_64
ReconMatrixPE256
RefLinesPE36
RepetitionTime2.17
SAR0.0329976
ScanOptionsIR\PFP\WE
ScanningSequenceGR\IR
SequenceNametfl3d3_16ns
SequenceVariantSK\SP\MP\OSP
SeriesDescriptiontfl_epinav_ME3_1mm_p2
SeriesNumber18
ShimSetting[2640, 5455, -7472, 337, -52, -932, 44, -152]
SliceThickness1
SoftwareVersionssyngo MR E11
SpoilingStateTrue
StationNameMRC35427
TxRefAmp232.23
WipMemBlockPrisma_epi_moco_navigator_ABCD_tfl.prot
md5sum727cad74a2fa89b4499d7e6006abea71
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.